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  5. LOC_Os03g20430.1

LOC_Os03g20430.1


Description : SU(VAR)3-9 homolog 3


Gene families : OG_01_0001830 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001830_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g20430.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g20430.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_16


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
MF GO:0018024 obsolete histone lysine N-methyltransferase activity ISM GOs from InterProScan
BP GO:0034968 histone lysine methylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015947 PUA-like_sf SUPERFAMILY 155 339
IPR007728 Pre-SET_dom ProSiteProfiles 390 450
IPR007728 Pre-SET_dom SMART 344 437
IPR036987 SRA-YDG_sf Gene3D 171 323
IPR007728 Pre-SET_dom Pfam 347 445
IPR003105 SRA_YDG SMART 168 319
IPR003105 SRA_YDG Pfam 172 319
IPR003105 SRA_YDG ProSiteProfiles 173 315

No CAZYmes available for this sequence

No external refs found!