LOC_Os03g21950.1

Description : FUMARASE 2

Gene families : OG_01_0005717 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005717_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g21950.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g21950.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_198
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_58

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004333	fumarate hydratase activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	ISM	GOs from InterProScan
BP	GO:0006106	fumarate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	ISM	GOs from InterProScan
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045239	tricarboxylic acid cycle enzyme complex	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR020557	Fumarate_lyase_CS	ProSitePatterns	355	364
IPR024083	Fumarase/histidase_N	Gene3D	43	177
IPR022761	Fumarate_lyase_N	Pfam	50	380
IPR005677	Fum_hydII	PANTHER	36	502
IPR008948	L-Aspartase-like	SUPERFAMILY	42	498
IPR000362	Fumarate_lyase_fam	PRINTS	309	336
IPR000362	Fumarate_lyase_fam	PRINTS	172	190
IPR000362	Fumarate_lyase_fam	PRINTS	355	371
IPR000362	Fumarate_lyase_fam	PRINTS	218	236
IPR018951	Fumarase_C_C	Pfam	446	498
IPR005677	Fum_hydII	CDD	43	497
IPR005677	Fum_hydII	Hamap	42	500
IPR005677	Fum_hydII	TIGRFAM	42	499

No CAZYmes available for this sequence

External Links

No external refs found!