LOC_Os03g22540.1

Description : Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase

Gene families : OG_01_0001619 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001619_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g22540.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g22540.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_178
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_129

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006482	protein demethylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008214	protein dealkylation	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016577	histone demethylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0032451	demethylase activity	None	Extended
MF	GO:0032452	histone demethylase activity	None	Extended
MF	GO:0032454	histone H3K9 demethylase activity	ISM	GOs from InterProScan
BP	GO:0033169	histone H3-K9 demethylation	ISM	GOs from InterProScan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070076	histone lysine demethylation	None	Extended
BP	GO:0070988	demethylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140457	protein demethylase activity	None	Extended
MF	GO:0140993	histone modifying activity	None	Extended
MF	GO:0141052	histone H3 demethylase activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003347	JmjC_dom	Pfam	750	840
IPR014977	WRC_dom	Pfam	11	49
IPR045109	JHDM2-like	PANTHER	7	915
IPR003347	JmjC_dom	ProSiteProfiles	588	857
IPR018866	Znf-4CXXC_R1	Pfam	147	208
IPR001841	Znf_RING	ProSiteProfiles	151	196
IPR003347	JmjC_dom	SMART	569	857
IPR014977	WRC_dom	ProSiteProfiles	10	54

No CAZYmes available for this sequence

External Links

No external refs found!