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  5. LOC_Os03g22790.1

LOC_Os03g22790.1


Description : beta-amylase 3


Gene families : OG_01_0009551 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009551_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g22790.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g22790.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_277
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_140


Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process ISM GOs from InterProScan
MF GO:0016161 beta-amylase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 80 492
IPR001554 Glyco_hydro_14 PRINTS 321 340
IPR001554 Glyco_hydro_14 PRINTS 244 266
IPR001554 Glyco_hydro_14 PRINTS 368 379
IPR001554 Glyco_hydro_14 PRINTS 118 132
IPR001554 Glyco_hydro_14 Pfam 102 430
IPR001554 Glyco_hydro_14 PANTHER 3 517
HMM Family HMM Length Query Length e-Value Query Start Query End
GH14 412 525 5.9e-106 86 476
No external refs found!