LOC_Os03g25420.1

Description : Putative endonuclease or glycosyl hydrolase

Gene families : OG_01_0010330 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010330_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g25420.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g25420.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_22

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	RNA nuclease activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005777	peroxisome	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	ISM	GOs from InterProScan
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030371	translation repressor activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0042579	microbody	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1903231	mRNA base-pairing translational repressor activity	ISM	GOs from InterProScan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR024768	Marf1	PANTHER	352	458
IPR024768	Marf1	PANTHER	459	973
IPR024768	Marf1	PANTHER	2	196
IPR024768	Marf1	PANTHER	210	344
IPR021139	NYN	Pfam	12	152
IPR025677	OST-HTH-assoc_dom	Pfam	924	972

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os03g25420.1

Expression Profile

Co-expression Networks

Functional Annotation