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  5. LOC_Os03g25990.1

LOC_Os03g25990.1


Description : expansin A15


Gene families : OG_01_0000144 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000144_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g25990.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g25990.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_163
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_51


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0009664 plant-type cell wall organization ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036749 Expansin_CBD_sf SUPERFAMILY 165 260
IPR036908 RlpA-like_sf SUPERFAMILY 29 186
IPR007117 Expansin_CBD ProSiteProfiles 178 260
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 48 168
IPR002963 Expansin PRINTS 126 143
IPR002963 Expansin PRINTS 60 74
IPR002963 Expansin PRINTS 179 200
IPR002963 Expansin PRINTS 143 156
IPR002963 Expansin PRINTS 167 179
IPR002963 Expansin PRINTS 246 262
IPR007112 Expansin/allergen_DPBB_dom SMART 65 158
IPR009009 RlpA-like_DPBB Pfam 65 158
IPR007118 Expan_Lol_pI PRINTS 69 87
IPR007118 Expan_Lol_pI PRINTS 47 65
IPR007118 Expan_Lol_pI PRINTS 151 167
IPR007118 Expan_Lol_pI PRINTS 246 260
IPR007118 Expan_Lol_pI PRINTS 29 44
IPR007118 Expan_Lol_pI PRINTS 208 222
IPR002963 Expansin PANTHER 3 264
IPR007117 Expansin_CBD Pfam 169 249
IPR036908 RlpA-like_sf Gene3D 14 163
IPR036749 Expansin_CBD_sf Gene3D 164 260

No CAZYmes available for this sequence

No external refs found!