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  5. LOC_Os03g27310.2

LOC_Os03g27310.2


Description : Histone superfamily protein


Gene families : OG_01_0000045 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000045_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g27310.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g27310.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_17


Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0046982 protein heterodimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000164 Histone_H3/CENP-A PRINTS 114 135
IPR000164 Histone_H3/CENP-A PRINTS 98 114
IPR000164 Histone_H3/CENP-A PRINTS 80 98
IPR000164 Histone_H3/CENP-A PRINTS 3 17
IPR000164 Histone_H3/CENP-A PRINTS 17 31
IPR000164 Histone_H3/CENP-A PRINTS 34 55
IPR000164 Histone_H3/CENP-A PRINTS 58 75
IPR009072 Histone-fold Gene3D 2 136
IPR000164 Histone_H3/CENP-A PANTHER 1 136
IPR000164 Histone_H3/CENP-A SMART 34 136
IPR007125 Histone_H2A/H2B/H3 Pfam 1 132
IPR000164 Histone_H3/CENP-A ProSitePatterns 15 21
IPR009072 Histone-fold SUPERFAMILY 2 133
IPR000164 Histone_H3/CENP-A ProSitePatterns 67 75

No CAZYmes available for this sequence

No external refs found!