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  5. LOC_Os03g28330.4

LOC_Os03g28330.4


Description : sucrose synthase 4


Gene families : OG_01_0001953 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001953_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g28330.4
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g28330.4
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_142


Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process ISM GOs from InterProScan
MF GO:0016157 sucrose synthase activity ISM GOs from InterProScan
MF GO:0016757 glycosyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000368 Sucrose_synth Pfam 12 558
IPR012820 Sucrose_synthase_pln/cyn PANTHER 2 815
IPR012820 Sucrose_synthase_pln/cyn TIGRFAM 29 807
IPR001296 Glyco_trans_1 Pfam 563 745
HMM Family HMM Length Query Length e-Value Query Start Query End
GT4 160 817 1.8e-45 570 738
No external refs found!