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  5. LOC_Os03g28420.1

LOC_Os03g28420.1


Description : fatty acid biosynthesis 1


Gene families : OG_01_0002318 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002318_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g28420.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g28420.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity ISM GOs from InterProScan
BP GO:0006633 fatty acid biosynthetic process ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020841 PKS_Beta-ketoAc_synthase_dom SMART 89 497
IPR018201 Ketoacyl_synth_AS ProSitePatterns 240 256
IPR017568 3-oxoacyl-ACP_synth-2 TIGRFAM 87 494
IPR014030 Ketoacyl_synth_N Pfam 87 332
IPR014031 Ketoacyl_synth_C Pfam 340 453
IPR000794 Beta-ketoacyl_synthase CDD 99 494
IPR000794 Beta-ketoacyl_synthase PANTHER 49 498
IPR016039 Thiolase-like Gene3D 71 498
IPR016039 Thiolase-like SUPERFAMILY 87 337
IPR016039 Thiolase-like SUPERFAMILY 300 495

No CAZYmes available for this sequence

No external refs found!