LOC_Os03g39640.2

Description : CBS domain-containing protein / transporter associated domain-containing protein

Gene families : OG_01_0002186 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002186_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g39640.2
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g39640.2
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_196

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000644	CBS_dom	ProSiteProfiles	429	487
IPR016169	FAD-bd_PCMH_sub2	Gene3D	499	608
IPR000644	CBS_dom	SMART	433	481
IPR000644	CBS_dom	SMART	367	416
IPR002550	CNNM	Pfam	166	343
IPR005170	Transptr-assoc_dom	Pfam	503	606
IPR000644	CBS_dom	ProSiteProfiles	362	423
IPR000644	CBS_dom	Pfam	358	415
IPR000644	CBS_dom	Pfam	427	481
IPR002550	CNNM	ProSiteProfiles	157	343
IPR044751	Ion_transp-like_CBS	CDD	357	478
IPR005170	Transptr-assoc_dom	SMART	502	608
IPR036318	FAD-bd_PCMH-like_sf	SUPERFAMILY	500	609

No CAZYmes available for this sequence

External Links

No external refs found!