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  5. LOC_Os03g42430.1

LOC_Os03g42430.1


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_01_0017702 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017702_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g42430.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g42430.1 No neighbors in network
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_66


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003340 B3_DNA-bd Pfam 42 122
IPR003340 B3_DNA-bd Pfam 268 340
IPR003340 B3_DNA-bd ProSiteProfiles 29 124
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 22 126
IPR003340 B3_DNA-bd CDD 30 122
IPR003340 B3_DNA-bd CDD 254 339
IPR015300 DNA-bd_pseudobarrel_sf Gene3D 234 369
IPR003340 B3_DNA-bd ProSiteProfiles 256 370
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 250 340
IPR003340 B3_DNA-bd SMART 32 124
IPR003340 B3_DNA-bd SMART 256 360
IPR044837 REM16-like PANTHER 4 376
IPR015300 DNA-bd_pseudobarrel_sf SUPERFAMILY 30 129

No CAZYmes available for this sequence

No external refs found!