1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g47010.1

LOC_Os03g47010.1


Description : glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein


Gene families : OG_01_0038861 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0038861_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g47010.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g47010.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_179


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 403 704
IPR031158 GH10_AS ProSitePatterns 626 636
IPR001000 GH10_dom ProSiteProfiles 400 698
IPR001000 GH10_dom Pfam 411 669
IPR008979 Galactose-bd-like_sf SUPERFAMILY 20 178
IPR001000 GH10_dom PRINTS 561 572
IPR001000 GH10_dom PRINTS 594 606
IPR001000 GH10_dom PRINTS 479 491
IPR008979 Galactose-bd-like_sf SUPERFAMILY 193 367
IPR003305 CenC_carb-bd Pfam 21 161
IPR003305 CenC_carb-bd Pfam 196 352
IPR044846 GH10 PANTHER 11 755
IPR001000 GH10_dom SMART 448 699
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM22 131 757 2.2e-29 22 161
GH10 303 757 5.8e-70 411 694
No external refs found!