LOC_Os03g47780.1

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0004053 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004053_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g47780.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g47780.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_354
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0031929	TOR signaling	ISM	GOs from InterProScan
CC	GO:0031931	TORC1 complex	ISM	GOs from InterProScan
CC	GO:0031932	TORC2 complex	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
CC	GO:0038201	TOR complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001680	WD40_rpt	ProSiteProfiles	253	294
IPR001680	WD40_rpt	ProSiteProfiles	207	252
IPR001680	WD40_rpt	ProSiteProfiles	74	115
IPR001680	WD40_rpt	SMART	246	285
IPR001680	WD40_rpt	SMART	109	147
IPR001680	WD40_rpt	SMART	24	62
IPR001680	WD40_rpt	SMART	67	106
IPR001680	WD40_rpt	SMART	200	243
IPR001680	WD40_rpt	SMART	150	190
IPR020472	G-protein_beta_WD-40_rep	PRINTS	230	244
IPR020472	G-protein_beta_WD-40_rep	PRINTS	272	286
IPR020472	G-protein_beta_WD-40_rep	PRINTS	93	107
IPR019775	WD40_repeat_CS	ProSitePatterns	230	244
IPR001680	WD40_rpt	ProSiteProfiles	1	30
IPR011047	Quinoprotein_ADH-like_supfam	SUPERFAMILY	7	305
IPR019775	WD40_repeat_CS	ProSitePatterns	93	107
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	5	310
IPR037588	MLST8	PANTHER	3	310
IPR019775	WD40_repeat_CS	ProSitePatterns	8	22
IPR001680	WD40_rpt	ProSiteProfiles	115	148
IPR001680	WD40_rpt	Pfam	26	62
IPR001680	WD40_rpt	Pfam	202	243
IPR001680	WD40_rpt	Pfam	70	106
IPR001680	WD40_rpt	Pfam	112	147
IPR001680	WD40_rpt	Pfam	249	284
IPR019775	WD40_repeat_CS	ProSitePatterns	134	148

No CAZYmes available for this sequence

External Links

No external refs found!