LOC_Os03g48760.1

Description : germin-like protein 4

Gene families : OG_01_0026167 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0026167_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g48760.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g48760.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_233

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030145	manganese ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001929	Germin	PRINTS	116	136
IPR001929	Germin	PRINTS	182	197
IPR001929	Germin	PRINTS	149	169
IPR006045	Cupin_1	Pfam	77	215
IPR006045	Cupin_1	SMART	67	219
IPR019780	Germin_Mn-BS	ProSitePatterns	111	124
IPR014710	RmlC-like_jellyroll	Gene3D	29	229
IPR011051	RmlC_Cupin_sf	SUPERFAMILY	30	225

No CAZYmes available for this sequence

External Links

No external refs found!