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  5. LOC_Os03g48904.1

LOC_Os03g48904.1


Description : Ankyrin repeat family protein


Gene families : OG_01_0011480 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011480_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g48904.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g48904.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_96
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_34


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036770 Ankyrin_rpt-contain_sf Gene3D 1 102
IPR044730 RNase_H-like_dom_plant CDD 653 715
IPR002156 RNaseH_domain Pfam 654 715
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 24 90
IPR026960 RVT-Znf Pfam 203 272

No CAZYmes available for this sequence

No external refs found!