LOC_Os03g49210.1

Description : pescadillo-related

Gene families : OG_01_0004739 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004739_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g49210.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g49210.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_295
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_20

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042254	ribosome biogenesis	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001357	BRCT_dom	SMART	339	417
IPR010613	PES	PANTHER	10	601
IPR010613	PES	Hamap	5	600
IPR036420	BRCT_dom_sf	SUPERFAMILY	338	428
IPR036420	BRCT_dom_sf	Gene3D	345	418
IPR010613	PES	Pfam	10	263
IPR001357	BRCT_dom	Pfam	340	425
IPR001357	BRCT_dom	ProSiteProfiles	337	427

No CAZYmes available for this sequence

External Links

No external refs found!