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Description : PLAT/LH2 domain-containing lipoxygenase family protein
Gene families : OG_01_0000612 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000612_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g49380.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g49380.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_93 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_125 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR013819 | LipOase_C | ProSiteProfiles | 168 | 877 |
| IPR013819 | LipOase_C | Pfam | 178 | 853 |
| IPR001246 | LipOase_plant | PRINTS | 234 | 253 |
| IPR001246 | LipOase_plant | PRINTS | 783 | 797 |
| IPR001246 | LipOase_plant | PRINTS | 201 | 217 |
| IPR001246 | LipOase_plant | PRINTS | 303 | 324 |
| IPR001246 | LipOase_plant | PRINTS | 161 | 182 |
| IPR001246 | LipOase_plant | PRINTS | 458 | 482 |
| IPR001246 | LipOase_plant | PRINTS | 352 | 368 |
| IPR001246 | LipOase_plant | PRINTS | 391 | 410 |
| IPR001246 | LipOase_plant | PRINTS | 135 | 153 |
| IPR020834 | LipOase_CS | ProSitePatterns | 550 | 560 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 170 | 877 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 22 | 166 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 38 | 165 |
| IPR001024 | PLAT/LH2_dom | Pfam | 64 | 164 |
| IPR000907 | LipOase | PANTHER | 3 | 877 |
| IPR001024 | PLAT/LH2_dom | SMART | 21 | 166 |
| IPR013819 | LipOase_C | PRINTS | 523 | 540 |
| IPR013819 | LipOase_C | PRINTS | 505 | 522 |
| IPR013819 | LipOase_C | PRINTS | 543 | 563 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 22 | 169 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 523 | 537 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 275 | 364 |
No CAZYmes available for this sequence
| No external refs found! |