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  5. LOC_Os03g49400.1

LOC_Os03g49400.1


Description : NRAMP metal ion transporter family protein


Gene families : OG_01_0005851 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005851_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g49400.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g49400.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_33


Type GO Term Name Evidence Source
BP GO:0009873 ethylene-activated signaling pathway ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0030001 metal ion transport ISM GOs from InterProScan
MF GO:0046873 metal ion transmembrane transporter activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001046 NRAMP_fam Pfam 41 390
IPR001046 NRAMP_fam PANTHER 550 1221
IPR001046 NRAMP_fam PRINTS 328 345
IPR001046 NRAMP_fam PRINTS 201 224
IPR001046 NRAMP_fam PRINTS 360 379
IPR001046 NRAMP_fam PRINTS 98 124
IPR017187 EIN2 PIRSF 1 512
IPR017187 EIN2 PIRSF 509 1299
IPR001046 NRAMP_fam PANTHER 3 482

No CAZYmes available for this sequence

No external refs found!