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  5. LOC_Os03g49880.1

LOC_Os03g49880.1


Description : TCP family transcription factor


Gene families : OG_01_0022547 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0022547_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g49880.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g49880.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_142
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_232


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017887 TF_TCP_subgr ProSiteProfiles 115 173
IPR005333 Transcription_factor_TCP PANTHER 22 387
IPR017888 CYC/TB1_R_domain ProSiteProfiles 250 267
IPR017887 TF_TCP_subgr Pfam 114 271

No CAZYmes available for this sequence

No external refs found!