LOC_Os03g50490.1

Description : glutamine synthase clone R1

Gene families : OG_01_0000301 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000301_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g50490.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g50490.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_646

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0004356	glutamine synthetase activity	ISM	GOs from InterProScan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006541	glutamine metabolic process	None	Extended
BP	GO:0006542	glutamine biosynthetic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016211	ammonia ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016880	acid-ammonia (or amide) ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036651	Gln_synt_N_sf	SUPERFAMILY	13	104
IPR036651	Gln_synt_N_sf	Gene3D	3	105
IPR008146	Gln_synth_cat_dom	SMART	105	353
IPR008146	Gln_synth_cat_dom	Pfam	125	258
IPR014746	Gln_synth/guanido_kin_cat_dom	SUPERFAMILY	105	355
IPR027302	Gln_synth_N_conserv_site	ProSitePatterns	57	74
IPR008147	Gln_synt_N	Pfam	23	99
IPR027303	Gln_synth_gly_rich_site	ProSitePatterns	239	255

No CAZYmes available for this sequence

External Links

No external refs found!

LOC_Os03g50490.1

Expression Profile

Co-expression Networks

Functional Annotation