LOC_Os03g51790.1

Description : GTP-binding protein, HflX

Gene families : OG_01_0004914 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004914_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g51790.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g51790.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_291
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006073	GTP-bd	Pfam	290	381
IPR016496	GTPase_HflX	PANTHER	50	381
IPR016496	GTPase_HflX	PANTHER	430	639
IPR032305	GTP-bd_M	Pfam	180	276
IPR027417	P-loop_NTPase	Gene3D	284	504
IPR042108	GTPase_HflX_N_sf	Gene3D	150	204
IPR027417	P-loop_NTPase	SUPERFAMILY	459	608
IPR030394	G_HFLX_dom	CDD	241	471
IPR027417	P-loop_NTPase	SUPERFAMILY	288	477
IPR030394	G_HFLX_dom	ProSiteProfiles	288	611

No CAZYmes available for this sequence

External Links

No external refs found!