1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g53190.2

LOC_Os03g53190.2


Description : histone H2A 11


Gene families : OG_01_0005476 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005476_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g53190.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g53190.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_47


Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
MF GO:0046982 protein heterodimerization activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032458 Histone_H2A_CS ProSitePatterns 36 42
IPR002119 Histone_H2A PANTHER 2 136
IPR007125 Histone_H2A/H2B/H3 Pfam 13 106
IPR009072 Histone-fold SUPERFAMILY 17 114
IPR002119 Histone_H2A SMART 17 137
IPR009072 Histone-fold Gene3D 16 137
IPR032454 Histone_H2A_C Pfam 107 136
IPR002119 Histone_H2A PRINTS 87 101
IPR002119 Histone_H2A PRINTS 114 132
IPR002119 Histone_H2A PRINTS 73 86
IPR002119 Histone_H2A PRINTS 58 73
IPR002119 Histone_H2A PRINTS 28 50
IPR002119 Histone_H2A CDD 24 133

No CAZYmes available for this sequence

No external refs found!