LOC_Os03g53500.1

Description : ATP-dependent RNA helicase, mitochondrial (SUV3)

Gene families : OG_01_0003456 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003456_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g53500.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g53500.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_275
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_1

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003724	RNA helicase activity	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
MF	GO:0008186	ATP-dependent activity, acting on RNA	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044774	Suv3_DEXQc	CDD	78	219
IPR027417	P-loop_NTPase	Gene3D	66	220
IPR001650	Helicase_C	SMART	257	345
IPR041082	Suv3_C_1	Pfam	427	468
IPR027417	P-loop_NTPase	Gene3D	221	372
IPR001650	Helicase_C	Pfam	244	345
IPR027417	P-loop_NTPase	SUPERFAMILY	75	347
IPR022192	SUV3_C	Pfam	493	540
IPR001650	Helicase_C	ProSiteProfiles	214	388

No CAZYmes available for this sequence

External Links

No external refs found!