LOC_Os03g53910.1

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_01_0002522 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002522_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g53910.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g53910.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_88
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_209

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0031072	heat shock protein binding	None	Extended
MF	GO:0051879	Hsp90 protein binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	Gene3D	25	185
IPR044059	Csn1/TTC4_wheel	Pfam	207	276
IPR019734	TPR_repeat	ProSiteProfiles	78	111
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	23	165
IPR019734	TPR_repeat	SMART	32	67
IPR019734	TPR_repeat	SMART	112	145
IPR019734	TPR_repeat	SMART	78	111

No CAZYmes available for this sequence

External Links

No external refs found!