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  5. LOC_Os03g55540.1

LOC_Os03g55540.1


Description : salt tolerance zinc finger


Gene families : OG_01_0005519 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005519_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g55540.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g55540.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_37
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_23


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036236 Znf_C2H2_sf SUPERFAMILY 97 188
IPR044653 AZF1/2/3-like PANTHER 4 267
IPR013087 Znf_C2H2_type ProSitePatterns 168 188
IPR013087 Znf_C2H2_type SMART 166 188
IPR013087 Znf_C2H2_type SMART 97 119
IPR013087 Znf_C2H2_type ProSiteProfiles 166 188
IPR013087 Znf_C2H2_type ProSiteProfiles 97 124
IPR013087 Znf_C2H2_type ProSitePatterns 99 119

No CAZYmes available for this sequence

No external refs found!