Sevir.4G157100.1

Description : RING/FYVE/PHD zinc finger superfamily protein

Gene families : OG_01_0005089 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005089_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G157100.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G157100.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_173
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_79

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR019787	Znf_PHD-finger	Pfam	182	228
IPR019787	Znf_PHD-finger	ProSiteProfiles	179	229
IPR000949	ELM2_dom	Pfam	273	387
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	169	237
IPR013083	Znf_RING/FYVE/PHD	Gene3D	133	239
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	182	226
IPR011124	Znf_CW	ProSiteProfiles	321	379
IPR001965	Znf_PHD	SMART	181	227

No CAZYmes available for this sequence

External Links

No external refs found!