LOC_Os03g57260.1

Description : zinc knuckle (CCHC-type) family protein

Gene families : OG_01_0012846 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012846_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g57260.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g57260.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_211
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_223

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001878	Znf_CCHC	SMART	111	127
IPR010666	Znf_GRF	Pfam	162	204
IPR010666	Znf_GRF	Pfam	228	258
IPR001878	Znf_CCHC	ProSiteProfiles	112	127
IPR036875	Znf_CCHC_sf	SUPERFAMILY	94	130

No CAZYmes available for this sequence

External Links

No external refs found!