LOC_Os03g58980.1

Description : germin-like protein 4

Gene families : OG_01_0014605 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014605_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g58980.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g58980.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_93

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0030145	manganese ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006045	Cupin_1	Pfam	79	223
IPR006045	Cupin_1	SMART	77	225
IPR011051	RmlC_Cupin_sf	SUPERFAMILY	36	231
IPR019780	Germin_Mn-BS	ProSitePatterns	120	133
IPR014710	RmlC-like_jellyroll	Gene3D	35	233
IPR001929	Germin	PRINTS	155	175
IPR001929	Germin	PRINTS	125	145
IPR001929	Germin	PRINTS	188	203

No CAZYmes available for this sequence

External Links

No external refs found!