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  5. LOC_Os03g61630.2

LOC_Os03g61630.2


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0005643 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005643_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g61630.2
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g61630.2
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_218


Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR037363 Sec13/Seh1_fam PANTHER 1 301
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 12 301
IPR001680 WD40_rpt SMART 196 241
IPR001680 WD40_rpt SMART 46 87
IPR001680 WD40_rpt SMART 247 286
IPR001680 WD40_rpt SMART 1 39
IPR001680 WD40_rpt SMART 139 191
IPR001680 WD40_rpt SMART 93 134
IPR001680 WD40_rpt Pfam 96 132
IPR001680 WD40_rpt Pfam 48 87
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 9 286
IPR001680 WD40_rpt ProSiteProfiles 53 87

No CAZYmes available for this sequence

No external refs found!