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  5. LOC_Os03g62410.1

LOC_Os03g62410.1


Description : phospholipase D delta


Gene families : OG_01_0000938 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000938_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g62410.1 No neighbors in network
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g62410.1
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_52


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004630 phospholipase D activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0046470 phosphatidylcholine metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001736 PLipase_D/transphosphatidylase SMART 355 390
IPR001736 PLipase_D/transphosphatidylase SMART 691 718
IPR025202 PLD-like_dom Pfam 545 727
IPR035892 C2_domain_sf SUPERFAMILY 18 181
IPR024632 PLipase_D_C Pfam 767 837
IPR035892 C2_domain_sf Gene3D 16 166
IPR000008 C2_dom ProSiteProfiles 1 155
IPR000008 C2_dom SMART 21 154
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 355 390
IPR015679 PLipase_D_fam PANTHER 12 847
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 691 718
IPR001736 PLipase_D/transphosphatidylase Pfam 356 390
IPR011402 PLipase_D_pln PIRSF 6 847
IPR000008 C2_dom Pfam 20 157

No CAZYmes available for this sequence

No external refs found!