LOC_Os03g62580.1

Description : Vacuolar sorting protein 9 (VPS9) domain

Gene families : OG_01_0003398 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003398_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os03g62580.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os03g62580.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_375
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_136

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003123	VPS9	ProSiteProfiles	106	250
IPR037191	VPS9_dom_sf	SUPERFAMILY	11	261
IPR003123	VPS9	SMART	139	259
IPR045046	Vps9-like	PANTHER	5	283
IPR037191	VPS9_dom_sf	Gene3D	102	266
IPR003123	VPS9	Pfam	142	244
IPR041545	DUF5601	Pfam	31	95

No CAZYmes available for this sequence

External Links

No external refs found!