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  5. LOC_Os04g02000.1

LOC_Os04g02000.1


Description : zinc finger (Ran-binding) family protein


Gene families : OG_01_0009001 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009001_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g02000.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g02000.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_52
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_169


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001876 Znf_RanBP2 Pfam 20 47
IPR001876 Znf_RanBP2 Pfam 63 91
IPR001876 Znf_RanBP2 Pfam 307 335
IPR001876 Znf_RanBP2 Pfam 178 205
IPR036443 Znf_RanBP2_sf SUPERFAMILY 172 206
IPR001876 Znf_RanBP2 ProSiteProfiles 63 92
IPR001876 Znf_RanBP2 ProSitePatterns 24 43
IPR001876 Znf_RanBP2 ProSitePatterns 311 330
IPR036443 Znf_RanBP2_sf SUPERFAMILY 57 92
IPR001876 Znf_RanBP2 ProSitePatterns 67 86
IPR001876 Znf_RanBP2 ProSiteProfiles 307 336
IPR036443 Znf_RanBP2_sf SUPERFAMILY 302 336
IPR001876 Znf_RanBP2 SMART 65 89
IPR001876 Znf_RanBP2 SMART 309 333
IPR001876 Znf_RanBP2 SMART 22 46
IPR001876 Znf_RanBP2 SMART 180 203
IPR036443 Znf_RanBP2_sf SUPERFAMILY 14 48
IPR001876 Znf_RanBP2 ProSiteProfiles 178 206
IPR001876 Znf_RanBP2 ProSiteProfiles 20 49

No CAZYmes available for this sequence

No external refs found!