LOC_Os04g08290.1

Description : C2H2 and C2HC zinc fingers superfamily protein

Gene families : OG_01_0013309 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013309_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g08290.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g08290.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_298
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_6

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009268	response to pH	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010044	response to aluminum ion	ISM	GOs from InterProScan
BP	GO:0010447	response to acidic pH	ISM	GOs from InterProScan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0050896	response to stimulus	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044300	STOP1/2	PANTHER	6	349
IPR018247	EF_Hand_1_Ca_BS	ProSitePatterns	180	192
IPR036236	Znf_C2H2_sf	SUPERFAMILY	202	229
IPR013087	Znf_C2H2_type	ProSiteProfiles	203	230
IPR013087	Znf_C2H2_type	ProSitePatterns	205	225
IPR013087	Znf_C2H2_type	SMART	289	311
IPR013087	Znf_C2H2_type	SMART	251	284
IPR013087	Znf_C2H2_type	SMART	203	225
IPR013087	Znf_C2H2_type	Pfam	203	225

No CAZYmes available for this sequence

External Links

No external refs found!