1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g08740.1

LOC_Os04g08740.1


Description : Signal transduction histidine kinase, hybrid-type, ethylene sensor


Gene families : OG_01_0009449 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009449_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g08740.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g08740.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_359
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_43


Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system ISM GOs from InterProScan
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005789 endoplasmic reticulum membrane ISM GOs from InterProScan
BP GO:0009723 response to ethylene ISM GOs from InterProScan
MF GO:0038199 ethylene receptor activity ISM GOs from InterProScan
MF GO:0051740 ethylene binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036890 HATPase_C_sf Gene3D 441 618
IPR001789 Sig_transdc_resp-reg_receiver SMART 640 756
IPR014525 ETR PIRSF 8 763
IPR011006 CheY-like_superfamily SUPERFAMILY 636 761
IPR003018 GAF SMART 190 349
IPR005467 His_kinase_dom ProSiteProfiles 382 615
IPR036890 HATPase_C_sf SUPERFAMILY 429 611
IPR003018 GAF Pfam 190 339
IPR001789 Sig_transdc_resp-reg_receiver Pfam 642 752
IPR029016 GAF-like_dom_sf Gene3D 167 340
IPR001789 Sig_transdc_resp-reg_receiver ProSiteProfiles 641 760

No CAZYmes available for this sequence

No external refs found!