LOC_Os04g11730.1

Description : methyl-CPG-binding domain protein 13

Gene families : OG_01_0020322 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0020322_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g11730.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR038945	MBD13-like	PANTHER	6	250
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	139	209
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	65	137
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	140	224
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	70	126
IPR001739	Methyl_CpG_DNA-bd	Pfam	71	120
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	2	54
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	1	63

No CAZYmes available for this sequence

External Links

No external refs found!