LOC_Os04g12660.1

Description : senescence-associated gene 12

Gene families : OG_01_0004346 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004346_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g12660.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_4

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013201	Prot_inhib_I29	Pfam	37	93
IPR013201	Prot_inhib_I29	SMART	37	93
IPR000668	Peptidase_C1A_C	SMART	123	300
IPR025660	Pept_his_AS	ProSitePatterns	242	252
IPR039417	Peptidase_C1A_papain-like	CDD	143	299
IPR000668	Peptidase_C1A_C	Pfam	147	300
IPR025661	Pept_asp_AS	ProSitePatterns	260	279
IPR038765	Papain-like_cys_pep_sf	SUPERFAMILY	31	300

No CAZYmes available for this sequence

External Links

No external refs found!