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  5. LOC_Os04g14450.1

LOC_Os04g14450.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0009410 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009410_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g14450.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g14450.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_327
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_204


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 77 178
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 207 241
IPR002885 Pentatricopeptide_rpt TIGRFAM 80 107
IPR002885 Pentatricopeptide_rpt TIGRFAM 209 242
IPR002885 Pentatricopeptide_rpt TIGRFAM 108 142
IPR002885 Pentatricopeptide_rpt Pfam 206 255
IPR002885 Pentatricopeptide_rpt Pfam 105 154
IPR011990 TPR-like_helical_dom_sf Gene3D 180 401
IPR002885 Pentatricopeptide_rpt Pfam 50 74
IPR011990 TPR-like_helical_dom_sf Gene3D 1 76
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 106 140

No CAZYmes available for this sequence

No external refs found!