LOC_Os04g16834.1

Description : Nucleic acid-binding, OB-fold-like protein

Gene families : OG_01_0035106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0035106_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g16834.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g16834.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_223
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_79

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003743	translation initiation factor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	ISM	GOs from InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR006196	RNA-binding_domain_S1_IF1	Pfam	19	81
IPR006196	RNA-binding_domain_S1_IF1	ProSiteProfiles	8	83
IPR012340	NA-bd_OB-fold	SUPERFAMILY	4	91
IPR004368	TIF_IF1	PANTHER	1	100
IPR004368	TIF_IF1	Hamap	12	85
IPR004368	TIF_IF1	CDD	18	81
IPR004368	TIF_IF1	TIGRFAM	14	82

No CAZYmes available for this sequence

External Links

No external refs found!