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  5. LOC_Os04g17650.1

LOC_Os04g17650.1


Description : sucrose synthase 6


Gene families : OG_01_0002786 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002786_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g17650.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g17650.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_51


Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process ISM GOs from InterProScan
MF GO:0016157 sucrose synthase activity ISM GOs from InterProScan
MF GO:0016757 glycosyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012820 Sucrose_synthase_pln/cyn PANTHER 1 757
IPR012820 Sucrose_synthase_pln/cyn TIGRFAM 26 756
IPR000368 Sucrose_synth Pfam 9 558
IPR001296 Glyco_trans_1 Pfam 566 734
HMM Family HMM Length Query Length e-Value Query Start Query End
GT4 160 781 2.4e-43 572 739
No external refs found!