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  5. LOC_Os04g18830.1

LOC_Os04g18830.1


Description : TRAF-like family protein


Gene families : OG_01_0038936 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0038936_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g18830.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_2


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045005 BPM1-6 PANTHER 36 206
IPR002083 MATH/TRAF_dom SMART 45 155
IPR002083 MATH/TRAF_dom CDD 44 172
IPR002083 MATH/TRAF_dom Pfam 53 168
IPR002083 MATH/TRAF_dom ProSiteProfiles 40 172
IPR008974 TRAF-like Gene3D 42 176

No CAZYmes available for this sequence

No external refs found!