LOC_Os04g22240.1

Description : Zinc finger (C3HC4-type RING finger) family protein

Gene families : OG_01_0007212 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007212_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g22240.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g22240.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_32
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_62

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001841	Znf_RING	SMART	144	182
IPR001841	Znf_RING	SMART	500	556
IPR001841	Znf_RING	SMART	18	62
IPR013083	Znf_RING/FYVE/PHD	Gene3D	487	601
IPR045134	UHRF1/2-like	PANTHER	8	652
IPR013083	Znf_RING/FYVE/PHD	Gene3D	2	77
IPR036987	SRA-YDG_sf	Gene3D	243	418
IPR003105	SRA_YDG	SMART	267	418
IPR001841	Znf_RING	ProSiteProfiles	500	556
IPR017907	Znf_RING_CS	ProSitePatterns	515	524
IPR003105	SRA_YDG	Pfam	275	415
IPR027370	Znf-RING_euk	Pfam	500	530
IPR003105	SRA_YDG	ProSiteProfiles	272	421
IPR011011	Znf_FYVE_PHD	SUPERFAMILY	8	65
IPR013083	Znf_RING/FYVE/PHD	Gene3D	98	212
IPR015947	PUA-like_sf	SUPERFAMILY	245	411
IPR019786	Zinc_finger_PHD-type_CS	ProSitePatterns	18	62
IPR001841	Znf_RING	ProSiteProfiles	144	183

No CAZYmes available for this sequence

External Links

No external refs found!