1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.4G177300.1

Sevir.4G177300.1


Description : ankyrin repeat family protein


Gene families : OG_01_0004300 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004300_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G177300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G177300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_55
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_70


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt ProSiteProfiles 37 64
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 343 453
IPR000210 BTB/POZ_dom SMART 181 278
IPR000210 BTB/POZ_dom SMART 347 455
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 181 269
IPR002110 Ankyrin_rpt Pfam 52 99
IPR044515 ABTB1 PANTHER 10 571
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 37 108
IPR000210 BTB/POZ_dom ProSiteProfiles 347 424
IPR000210 BTB/POZ_dom Pfam 343 451
IPR000210 BTB/POZ_dom Pfam 181 275
IPR036770 Ankyrin_rpt-contain_sf Gene3D 30 167
IPR011333 SKP1/BTB/POZ_sf Gene3D 323 487
IPR000210 BTB/POZ_dom ProSiteProfiles 181 248
IPR011333 SKP1/BTB/POZ_sf Gene3D 180 293

No CAZYmes available for this sequence

No external refs found!