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  5. LOC_Os04g28420.1

LOC_Os04g28420.1


Description : rotamase FKBP 1


Gene families : OG_01_0000774 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000774_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g28420.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g28420.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_54
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_22


Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001179 PPIase_FKBP_dom ProSiteProfiles 301 393
IPR019734 TPR_repeat Pfam 495 527
IPR001179 PPIase_FKBP_dom Pfam 179 270
IPR001179 PPIase_FKBP_dom Pfam 64 153
IPR001179 PPIase_FKBP_dom Pfam 295 390
IPR001179 PPIase_FKBP_dom ProSiteProfiles 68 156
IPR019734 TPR_repeat SMART 460 493
IPR019734 TPR_repeat SMART 494 527
IPR019734 TPR_repeat SMART 411 444
IPR011990 TPR-like_helical_dom_sf Gene3D 396 554
IPR001179 PPIase_FKBP_dom ProSiteProfiles 184 273
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 408 559
IPR019734 TPR_repeat ProSiteProfiles 494 527

No CAZYmes available for this sequence

No external refs found!