LOC_Os04g31620.1

Description : splicing factor-related

Gene families : OG_01_0006030 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006030_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g31620.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g31620.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_272
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_67

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012677	Nucleotide-bd_a/b_plait_sf	Gene3D	57	157
IPR045071	BBP-like	PANTHER	364	418
IPR045071	BBP-like	PANTHER	1	338
IPR035979	RBD_domain_sf	SUPERFAMILY	71	160
IPR000504	RRM_dom	SMART	75	148
IPR000504	RRM_dom	ProSiteProfiles	74	152
IPR000504	RRM_dom	Pfam	76	145

No CAZYmes available for this sequence

External Links

No external refs found!