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  5. LOC_Os04g32020.1

LOC_Os04g32020.1


Description : 2-oxoglutarate dehydrogenase, E1 component


Gene families : OG_01_0005965 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005965_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g32020.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g32020.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_356
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_189


Type GO Term Name Evidence Source
MF GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity ISM GOs from InterProScan
BP GO:0006099 tricarboxylic acid cycle ISM GOs from InterProScan
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor ISM GOs from InterProScan
MF GO:0030976 thiamine pyrophosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR042179 KGD_C_sf Gene3D 750 898
IPR029061 THDP-binding SUPERFAMILY 502 738
IPR005475 Transketolase-like_Pyr-bd Pfam 518 733
IPR001017 DH_E1 Pfam 124 448
IPR011603 2oxoglutarate_DH_E1 PIRSF 1 897
IPR029061 THDP-binding SUPERFAMILY 31 464
IPR011603 2oxoglutarate_DH_E1 TIGRFAM 2 894
IPR031717 KGD_C Pfam 754 895
IPR011603 2oxoglutarate_DH_E1 PANTHER 1 902
IPR005475 Transketolase-like_Pyr-bd SMART 519 732

No CAZYmes available for this sequence

No external refs found!