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  5. LOC_Os04g32460.1

LOC_Os04g32460.1


Description : auxin signaling F-box 2


Gene families : OG_01_0003454 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003454_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g32460.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g32460.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_86
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_48


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR041101 Transp_inhibit Pfam 61 107
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 475 500
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 366 390
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 99 123
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 426 449
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 124 149
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 309 332
IPR036047 F-box-like_dom_sf SUPERFAMILY 1 35
IPR001810 F-box_dom SMART 4 45
IPR032675 LRR_dom_sf Gene3D 41 575
IPR041567 COI1_F-box Pfam 1 41

No CAZYmes available for this sequence

No external refs found!