LOC_Os04g34930.1

Description : COP9 signalosome, subunit CSN8

Gene families : OG_01_0008675 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008675_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g34930.1
Neighborhood	Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g34930.1
Cluster	Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_286
Cluster	Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_38

Type	GO Term	Name	Evidence	Source
BP	GO:0000338	protein deneddylation	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0008180	COP9 signalosome	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010387	COP9 signalosome assembly	ISM	GOs from InterProScan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR033464	CSN8_PSD8_EIF3K	Pfam	39	174
IPR000717	PCI_dom	ProSiteProfiles	6	189
IPR033205	COP9_CSN8	PANTHER	1	196

No CAZYmes available for this sequence

External Links

No external refs found!