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Description : lipoxygenase 3
Gene families : OG_01_0003664 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003664_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g37430.1 | |
| Neighborhood | Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g37430.1 | |
| Cluster | Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_37 | |
| Cluster | Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_122 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR013819 | LipOase_C | Pfam | 216 | 644 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 68 | 204 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 67 | 208 |
| IPR013819 | LipOase_C | PRINTS | 548 | 565 |
| IPR013819 | LipOase_C | PRINTS | 530 | 547 |
| IPR013819 | LipOase_C | PRINTS | 568 | 588 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 209 | 645 |
| IPR001246 | LipOase_plant | PRINTS | 200 | 221 |
| IPR001246 | LipOase_plant | PRINTS | 174 | 192 |
| IPR001246 | LipOase_plant | PRINTS | 378 | 394 |
| IPR001246 | LipOase_plant | PRINTS | 417 | 436 |
| IPR001246 | LipOase_plant | PRINTS | 484 | 508 |
| IPR001246 | LipOase_plant | PRINTS | 271 | 290 |
| IPR001246 | LipOase_plant | PRINTS | 333 | 354 |
| IPR001246 | LipOase_plant | PRINTS | 239 | 255 |
| IPR001024 | PLAT/LH2_dom | Pfam | 141 | 203 |
| IPR020834 | LipOase_CS | ProSitePatterns | 575 | 585 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 548 | 562 |
| IPR013819 | LipOase_C | ProSiteProfiles | 207 | 643 |
| IPR000907 | LipOase | PANTHER | 26 | 644 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 326 | 409 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 79 | 205 |
| IPR001024 | PLAT/LH2_dom | SMART | 66 | 205 |
No CAZYmes available for this sequence
| No external refs found! |