Sevir.4G186200.1

Description : N2,N2-dimethylguanosine tRNA methyltransferase

Gene families : OG_01_0011353 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011353_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.4G186200.1	No neighbors in network
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.4G186200.1
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_76

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0004809	obsolete tRNA (guanine-N2-)-methyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002905	Trm1	Pfam	52	462
IPR002905	Trm1	PANTHER	1	533
IPR042296	tRNA_met_Trm1_C	Gene3D	405	463
IPR002905	Trm1	ProSiteProfiles	50	461
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	51	463
IPR002905	Trm1	TIGRFAM	52	462

No CAZYmes available for this sequence

External Links

No external refs found!