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  5. LOC_Os04g40420.1

LOC_Os04g40420.1


Description : SWITCH/sucrose nonfermenting 3A


Gene families : OG_01_0008970 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008970_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza sativa coexpression network - v0.2 (X-meeting 2023): LOC_Os04g40420.1
Neighborhood Oryza sativa coexpression network - Wang et al (2014): LOC_Os04g40420.1
Cluster Oryza sativa HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_14
Cluster Oryza sativa HCCA coexpression clusters - Wang et al (2014): Cluster_126


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017884 SANT_dom ProSiteProfiles 242 293
IPR001005 SANT/Myb ProSiteProfiles 239 289
IPR007526 SWIRM ProSiteProfiles 24 127
IPR001005 SANT/Myb CDD 246 284
IPR009057 Homeobox-like_sf SUPERFAMILY 242 294
IPR009057 Homeobox-like_sf SUPERFAMILY 24 125
IPR036388 WH-like_DNA-bd_sf Gene3D 30 123
IPR001005 SANT/Myb SMART 243 291
IPR017930 Myb_dom Pfam 245 287
IPR007526 SWIRM Pfam 27 118
IPR032451 SMARCC_C Pfam 463 538

No CAZYmes available for this sequence

No external refs found!